decorate_confusion: decorate_confusion

In hemberg-lab/sctransfermap: sctransfermap for predicting cell type in single-cell data (RNA-seq and ATAC-seq)

Description

add unassign count from confusion matrix (internal function of predict_cell)

Usage

decorate_confusion(confusion, y, cellnames, sname)

Arguments

confusion	confusion matrix from "transfer_map_consensus" function in Julia
y	table of count for each cell type (query) - y <- table(field(query_signature, "celltypes"))
cellnames	cell type of query data
sname	cell type of side-information

Value

a confusion matrix that has unassign count

Examples

NA

hemberg-lab/sctransfermap documentation built on Nov. 11, 2019, 6:23 a.m.