validation_sample: validation_sample
In hemberg-lab/sctransfermap: sctransfermap for predicting cell type in single-cell data (RNA-seq and ATAC-seq)
Description
Usage
Arguments
Value
Examples
Description
calculate F1 scores and unassign ratio
Usage
1
validation_sample(conf)
Arguments
conf
confusion matrix from predict_cell
Value
f1_score, unassign
f1_score: list of F1 scores for each sample
unassign: list of unassign ratio for each sample
Examples
1
2
conf <- predict_cell(att_set, query_signature)
res <- validation_sample(conf)
hemberg-lab/sctransfermap documentation built on Nov. 11, 2019, 6:23 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
calculate F1 scores and unassign ratio
Usage
1 | validation_sample(conf)
|
Arguments
conf |
confusion matrix from predict_cell |
Value
f1_score, unassign
f1_score: list of F1 scores for each sample
unassign: list of unassign ratio for each sample
Examples
1 2 | conf <- predict_cell(att_set, query_signature)
res <- validation_sample(conf)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.