Description Usage Arguments Value Examples
prediction of cell type by a given confusion matrix from "predict_cell". Assume binomial distribution: n: total cell count for each query celltype / p: 1/celltypes from cell ontology / X (for z score): cell count for each celltype from cell ontology. Only consider max cell count (draw -> mixed)
1 | estimate_celltype(conf)
|
conf |
confusion matrix from "predict_cell" |
suggests matched cell type for corresponding query cell type with q-value, respectively
1 2 | confusion <- predict_cell(att_set, query)
estimated_cell <- estimate_celltype(confusion)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.