Description Usage Arguments Value Examples
generation of side-information from expression or peak matrix
1 | generate_sideinformation(Side_mat, Cellnames, Sdim = 200)
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Side_mat |
matrix class composed of gene/peak_location(row)-by-cell(column) |
Sdim |
the size of side-information for each cell type |
cellnames |
cell name of Side_mat (column name) |
a side-information which could be directly used in create_siganture or create_attribute with w2v_index = FALSE (julia_object)
1 2 3 | d <- make_input(input_var)
s <- generate_sideinformation(d$norm_matrix, d$cellname)
- result should be directly used with w2v_index = FALSE
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