validation: validation
In hemberg-lab/sctransfermap: sctransfermap for predicting cell type in single-cell data (RNA-seq and ATAC-seq)
Description
Usage
Arguments
Value
Examples
Description
validation of known data
Usage
1
validation(conf_ratio)
Arguments
conf_ratio
confusion ratio matrix from confusion_ratio
Value
True postivie rate and unassign ratio for each cell type, respectively
Examples
1
2
3
confusion <- predict_cell(att_set, signature)
conf_ratio <- confusion_ratio(conf_ratio)
conf_val <- validation(conf_ratio)
hemberg-lab/sctransfermap documentation built on Nov. 11, 2019, 6:23 a.m.
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Description Usage Arguments Value Examples
Description
validation of known data
Usage
1 | validation(conf_ratio)
|
Arguments
conf_ratio |
confusion ratio matrix from confusion_ratio |
Value
True postivie rate and unassign ratio for each cell type, respectively
Examples
1 2 3 | confusion <- predict_cell(att_set, signature)
conf_ratio <- confusion_ratio(conf_ratio)
conf_val <- validation(conf_ratio)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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