Man pages for hemberg-lab/sctransfermap
sctransfermap for predicting cell type in single-cell data (RNA-seq and ATAC-seq)
| add_attribute_set | add_attribute_set |
| add_signature_set | add_signature_set |
| confusion_ratio | confusion_ratio |
| convert_seurat | convert_seurat |
| create_attribute | create_attribute |
| create_meta_index_av | create_meta_index_av |
| create_signature | create_signature |
| decorate_confusion | decorate_confusion |
| estimate_celltype | estimate_celltype |
| generate_sideinformation | generate_sideinformation |
| importdata | importdata |
| import_sparse | import_sparse |
| import_tm_facs | import_tm_facs |
| julia_environment | julia_environment |
| leave_one_val | leave_one_val |
| logistic_prediction_cell | logistic_prediciton_cell |
| make_attribute_set | make_attribute_set |
| make_cellontology | make_cellontology |
| make_input | make_input |
| make_input_tm_facs | make_input_tm_facs |
| make_signature_set | make_signature_set |
| make_stopwords | make_stopwords |
| make_tm_facs_attribute_set | make_tm_facs_attribute_set |
| make_tm_facs_signature_set | make_tm_facs_signature_set |
| make_w2v | make_w2v |
| make_w2v_sideinfo | make_w2v_sideinfo |
| n_fold_logistic | Title |
| predict_cell | predict_cell |
| quick_prediction | quick_prediction |
| quick_training | quick_training |
| r2julia_sort | r2julia_sort |
| save_sparse_data | save_sparse_data |
| sparse_tm_facs | sparse_tm_facs |
| tissue_merge | tissue_merge |
| tm_facs_logistic | tm_facs_logistic |
| validation | validation |
| validation_sample | validation_sample |
