correctPval: Correct _p_ values
In mariavica/mircomb: An R package for analyzing miRNA-mRNA interactions

Correct p values from one column of a net slot.

1	correctPval(obj, method.adj = "BH", pval= "pval")

`obj`	a `corObject` with a `net` slot already defined.
`method.adj`	one of `"holm"`, `"hochberg"`, `"hommel"`, `"bonferroni"`, `"BH"`, `"BY"`, `"fdr"`, `"none"`.
`pval`	name of the column with the p values to correct.

a corObject in which a column named adj.pval, which contains the corrected p values, has been added to the net slot.

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data(data.obj)
data.obj <- correctPval (data.obj, method.adj="BH", pval="pval")
head(data.obj@net)

mariavica/mircomb documentation built on Feb. 3, 2020, 2:28 a.m.

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