boxplotSamples: Boxplots of samples expression

In mariavica/mircomb: An R package for analyzing miRNA-mRNA interactions

Description

Plot boxplots of the miRNA or mRNA expression, for each sample. It is possible to colour the samples according to a phenotypical description.

Usage

boxplotSamples(obj, subset, col.color = 1, las = 1, colors = c("turquoise", "violet"))

Arguments

obj	a corObject
subset	"miRNA" or "mRNA"
col.color	number or name of the column in the pheno.miRNA or pheno.mRNA slot which define the grouping variables
las	las parameter
colors	character vector indicating the colors that will be used for each variable from col.color

See Also

plotCordist, boxplotCorrelation

Examples

data(data.obj)
boxplotSamples(data.obj, "miRNA", col.color=1)
boxplotSamples(data.obj, "mRNA", col.color=1)

mariavica/mircomb documentation built on Feb. 3, 2020, 2:28 a.m.