selSubsetCor: Select relevant miRNA-mRNA interactions
In mariavica/mircomb: An R package for analyzing miRNA-mRNA interactions
Description
Usage
Arguments
Value
See Also
Examples
Description
Select differentially expressed miRNAs or mRNAs, according to your criteria
Usage
1
2
selSubsetCor(obj, pval.cutoff = 1, dat.sum = 0, sub.miRNA = NULL,
sub.mRNA = NULL)
Arguments
obj
a corObject
pval.cutoff
maximum adj.pval of the selected miRNA-mRNA pairs
dat.sum
minimum number of concurrences across databases of the selected miRNA-mRNA pairs
sub.miRNA
(optional) character vector, limit to these miRNAs
sub.mRNA
(optional) character vector, limit to these mRNAs
Value
A data.frame with the selected miRNA-mRNA pairs.
See Also
writeCsv, writeExcel, writeSif
Examples
1
2
data(data.obj)
selSubsetCor(data.obj, pval.cutoff=0.05, dat.sum=2)
mariavica/mircomb documentation built on Feb. 3, 2020, 2:28 a.m.
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Description Usage Arguments Value See Also Examples
Description
Select differentially expressed miRNAs or mRNAs, according to your criteria
Usage
1 2 | selSubsetCor(obj, pval.cutoff = 1, dat.sum = 0, sub.miRNA = NULL,
sub.mRNA = NULL)
|
Arguments
obj |
a corObject |
pval.cutoff |
maximum adj.pval of the selected miRNA-mRNA pairs |
dat.sum |
minimum number of concurrences across databases of the selected miRNA-mRNA pairs |
sub.miRNA |
(optional) character vector, limit to these miRNAs |
sub.mRNA |
(optional) character vector, limit to these mRNAs |
Value
A data.frame with the selected miRNA-mRNA pairs.
See Also
writeCsv, writeExcel, writeSif
Examples
1 2 | data(data.obj)
selSubsetCor(data.obj, pval.cutoff=0.05, dat.sum=2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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