data.obj: Example of a 'corObject'

In mariavica/mircomb: An R package for analyzing miRNA-mRNA interactions

Description

Example of a corObject that was used for the main vignette.

Usage

data("data.obj")

Format

The format is: Formal class 'corObject' [package "miRComb"] with 13 slots ..@ dat.miRNA : numeric matrix ..@ dat.mRNA : numeric matrix ..@ pheno.miRNA :'data.frame' ..@ pheno.mRNA :'data.frame' ..@ cor : numeric matrix ..@ pval : numeric matrix ..@ net :'data.frame' ..@ diffexp.miRNA:'data.frame' ..@ diffexp.mRNA :'data.frame' ..@ sig.miRNA : character ..@ sig.mRNA : character ..@ GO.results :List ..@ info :List

Source

Modified from: Affò S, Dominguez M, Lozano JJ, Sancho-Bru P et al. Transcriptome analysis identifies TNF superfamily receptors as potential therapeutic targets in alcoholic hepatitis. Gut 2013 Mar;62(3):452-60. PMID: 22637703

References

Affò S, Dominguez M, Lozano JJ, Sancho-Bru P et al. Transcriptome analysis identifies TNF superfamily receptors as potential therapeutic targets in alcoholic hepatitis. Gut 2013 Mar;62(3):452-60. PMID: 22637703

Examples

data(data.obj)
str(data.obj)

mariavica/mircomb documentation built on Feb. 3, 2020, 2:28 a.m.