plotPca: PCA with miRNA or mRNA data

Description Usage Arguments Value See Also Examples

Description

Plot Principal Components Analysis of miRNA or mRNA data

Usage

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plotPca(obj, subset, col.color = 1, colors = c("turquoise", "violet"), pos.leg="topleft",
	names = FALSE, ...)

Arguments

obj

a corObject.

subset

"miRNA" or "mRNA".

col.color

name of the column in the pheno slot used for coloring the samples.

colors

In case of a two-level factor grouping, colors to be used.

pos.leg

legend position, "bottomright", "topright", "bottomleft" or "topleft"

names

FALSE or TRUE. Plot names of the samples.

...

further arguments.

Value

A pca plot showing the principal components analysis (PCA) of miRNA or mRNA data.

See Also

plot3d

Examples

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mariavica/mircomb documentation built on Feb. 3, 2020, 2:28 a.m.