exprs.test.statistic.metric: Normalized and smoothened results of group specific...

Description Usage Arguments Value

View source: R/signature.R

Description

Normalized and smoothened results of group specific differential expression test

Usage

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exprs.test.statistic.metric(ES, group.by = CLUSTER.LABEL, groups = NULL,
  log.base = 2, test.statistic.metric.prefix = TEST.STATS.METRIC.PREFIX,
  diff.expr.prefix = DIFF.EXPR.PREFIX)

Arguments

ES

(ExpressionSet) an ExpressionSet object containing the single cell RNA-seq data

group.by

(character) the name of the column that contains the cluster information

groups

(character) the clusters for signature prediction

log.base

(numeric) the base of logarithm

test.statistic.metric.prefix

(character) prefix for labeling the columns encoding the results of test statistic metric for each group

diff.expr.prefix

(character) prefix for labeling the columns encoding the results of differential test

Value

an ExpressionSet object containing the results of test statistic metrics in the attributes of fData


minzheguo/SINCERA documentation built on Feb. 3, 2021, 2:31 p.m.