drivingforce.rankTFs: Rank TFs based on their importance to the LCC measured by six...

Description Usage Arguments Value

Description

Rank TFs based on their importance to the LCC measured by six metrics

Usage

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drivingforce.rankTFs(object, groups = NULL, metrics = c("DC", "CC", "BC",
  "DFC", "DCC", "DDC"), ...)

Arguments

object

A sincera object

groups

The cell groups for TF ranking

metrics

The TF importance metrics that will be used for the ranking, possible values include DC, CC, BC, DFC, DCC, DDC.

Value

An updated sincera object, use getDF with name="tfranks" to access the lcc


minzheguo/SINCERA documentation built on Feb. 3, 2021, 2:31 p.m.