errorList5: pre-computed errors from CPA on five-fraction data

In mooredf22/protlocassign: Estimation of protein distribution from quantitative subcellular fractionation experiments using a constrained proportional assignment model

pre-computed errors from CPA on five-fraction data

Description

A set of pre-computed errors from applying CPA from five-fraction simulated mixture data to simulated proteins resident in varying degrees in two compartments, for all combinations of pairs of compartments This is for input into the "mixtureHeatMap" program, optional argument "errorListIn". See tutorial 5 for details

Usage

data(errorList5)

Format

A data frame of pairwise errors

RSA

errors using RSA values

NSA

errors using NSA values

Acup

errors using Acup values

log RSA

errors using log RSA values

log NSA

errors using log NSA values

log Acup

errors using log Acup values

Value

set of pre-computed errors from applying CPA from five-fraction data

Examples

data(errorList5)
head(errorList5)

mooredf22/protlocassign documentation built on Sept. 13, 2023, 3:57 p.m.