mooredf22/protlocassign0p1p1: Compute constrained proportional assignments for fractionated protein abundance

This package fits a constrained proportional assignment (cpa) model to mass spectrometry data to proportionally assign proteins to subcellular locations. The package includes transformations to improve the accuracy of the assignments as well as facilities for simulating mixtures and evaluating the perfomance of cpa on those mixtures. Also included are facilities for summarizing spectral-level data using random effects models to calculate average protein profiles.

install.packages("remotes")
remotes::install_github("mooredf22/protlocassign0p1p1")