Files in mooredf22/protlocassign0p1p1
Compute constrained proportional assignments for fractionated protein abundance
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/OutlierFind.R
R/RSAtransform.r
R/cpaProgs.R
R/fCPAsubsets.r
R/markerProfilePlot.r
R/mixtureAreaError.r
R/mixtureHeatMap.r
R/mixturePlot.r
R/mixturePlotPanel.r
R/profileSummarize.r
R/protDistanceCompute.R
R/protNSA_test.r
R/protPepProfile.r
R/protPepProfilePlot.R
R/protProfilePlot.R
R/proteinDataPrep.R
R/proteinMix.r
R/refProfilePlot.r
R/spectraNSA_AT5tmtMS2.r
README.md
data/TLN1_test.rda
data/markerListJadot.rda
data/protNSA_AT5tmtMS2.rda
data/protNSA_test.rda
data/protPepNSA_AT5tmtMS2.rda
data/spectraNSA_AT5tmtMS2.rda
data/totProtAT5.rda
man/AcupFromNSA.Rd
man/AcupFromRSA.Rd
man/NSAfromAcup.Rd
man/NSAfromRSA.Rd
man/RSAfromAcup.Rd
man/RSAfromNSA.Rd
man/assignCPAloc.Rd
man/fCPAone.Rd
man/fCPAsubsets.Rd
man/fitCPA.Rd
man/locationProfileSetup.Rd
man/markerListJadot.Rd
man/markerProfilePlot.Rd
man/mixtureAreaError.Rd
man/mixtureHeatMap.Rd
man/mixturePlot.Rd
man/mixturePlotPanel.Rd
man/nearestProts.Rd
man/outlierFind.Rd
man/profileSummarize.Rd
man/protCap.Rd
man/protIndex.Rd
man/protNSA_AT5tmtMS2.Rd
man/protNSA_test.Rd
man/protPepNSA_AT5tmtMS2.Rd
man/protPepPlotfun.Rd
man/protPepProfile.Rd
man/protPepProfile.i.Rd
man/protPlotfun.Rd
man/proteinDataPrep.Rd
man/proteinMix.Rd
man/refProfilePlot.Rd
man/spectraNSA_AT5tmtMS2.Rd
man/totProtAT5.Rd
man/vecUnitize.Rd
man/vectorizeAll.Rd
protlocassign.Rproj
vignettes/Vignette_5_Using_five_classical_fractionation_channels_on_CPA.html
vignettes/vignette_1_protlocassign_introductory_tutorial.Rmd
vignettes/vignette_1_protlocassign_introductory_tutorial.html
vignettes/vignette_2_relative_specific_amount_and_CPA_transformations.Rmd
vignettes/vignette_2_relative_specific_amount_and_CPA_transformations.html
vignettes/vignette_3_protlocassign_transformations_notation_and_mixtures.Rmd
vignettes/vignette_3_protlocassign_transformations_notation_and_mixtures.html
vignettes/vignette_4_more_on_mixtures.Rmd
vignettes/vignette_4_more_on_mixtures.html
vignettes/vignette_5_Using_classical_fractionation_with_five_compartments_on_CPA.Rmd
vignettes/vignette_6_working_with_spectral_level_data.Rmd
vignettes/vignette_6_working_with_spectral_level_data.html
vignettes/vignette_7_combined_analysis_proteins_peptides.Rmd
vignettes/vignette_7_combined_analysis_proteins_peptides.html
vignettes/vignette_8_distance_btwn_proteins.Rmd
vignettes/vignette_8_distance_btwn_proteins.html
