Description Usage Arguments Value Examples
Compute relative specific amount from relative amounts in protein fractions
1 | NSAfromAcup(Acup, NstartMaterialFractions, totProt = NULL)
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Acup |
amount of given protein in fraction / amount of that given protein in starting material |
NstartMaterialFractions |
Number of differential fractions, typically 6, for N, M, L1, L2, P, and S |
totProt |
Total protein counts in each of the differential and nycodenz fractions; this is necessary to compute RSA's |
NSA: normalized specific amount
1 2 3 4 5 | data(protNSA_test)
data(totProtAT5)
protAcup <- AcupFromNSA(protNSA_test[,seq_len(9)], NstartMaterialFractions = 9, totProt=totProtAT5)
protNSA <- NSAfromAcup(protAcup, NstartMaterialFractions = 9, totProt=totProtAT5)
all.equal(protNSA, protNSA_test[,seq_len(9)])
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