refProfilePlot: Plot profiles of reference proteins

In mooredf22/protlocassign0p1p1: Compute constrained proportional assignments for fractionated protein abundance

Description

This function plots profiles of reference proteins and also the average profile for each compartment

Usage

refProfilePlot(
  refLoc,
  markerList,
  protProfileSummary,
  markerProfiles = markerProfiles,
  refProtPlot = NULL
)

Arguments

refLoc	the name of the reference subcellular compartment to plot
markerList	List of reference proteins
protProfileSummary	data frame of protein names (as row names) and relative abundance levels.
markerProfiles	A matrix markerProfiles giving the abundance level profiles of the subcellular locations
refProtPlot	index of reference protein to include in plot

Value

Plot of profiles of reference proteins

mooredf22/protlocassign0p1p1 documentation built on Feb. 7, 2022, 1:55 a.m.