totProtAT5: totProtAT5
In mooredf22/protlocassign0p1p1: Compute constrained proportional assignments for fractionated protein abundance
Description
Usage
Format
References
Examples
Description
Adjustment factors for the tmtMS2 data, to adjust the relative protein amounts as measured
by the mass spectrometer to the amounts of protein in each channel in the original sample.
This is a vector with nine values: there is one value for each of the six fraction channels and the three Nycodenz channels.
Note that the sum of the three Nycodenz channels (Nyc.1, Nyc.2, Nyc.3) equals the amount in L1.
These values are used to adjust the levels in the data set "geneProfileSummaryTMTms2" to re-create the levels in the original samples.
Usage
1
data("totProtAT5")
Format
The format is:
names: "N" "M" "L1" "L2" "P" "S" "Nyc.1" "Nyc.2" "Nyc.3""
References
A Tannous et al. (2020)
Examples
1
mooredf22/protlocassign0p1p1 documentation built on Feb. 7, 2022, 1:55 a.m.
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Description Usage Format References Examples
Description
Adjustment factors for the tmtMS2 data, to adjust the relative protein amounts as measured by the mass spectrometer to the amounts of protein in each channel in the original sample. This is a vector with nine values: there is one value for each of the six fraction channels and the three Nycodenz channels. Note that the sum of the three Nycodenz channels (Nyc.1, Nyc.2, Nyc.3) equals the amount in L1. These values are used to adjust the levels in the data set "geneProfileSummaryTMTms2" to re-create the levels in the original samples.
Usage
1 | data("totProtAT5")
|
Format
The format is: names: "N" "M" "L1" "L2" "P" "S" "Nyc.1" "Nyc.2" "Nyc.3""
References
A Tannous et al. (2020)
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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