mixturePlotPanel: plot mixture of all two compartment profile combinations as...

In mooredf22/protlocassign0p1p1: Compute constrained proportional assignments for fractionated protein abundance

Description

plot mixture of all two compartment profile combinations as panel; assumes eight compartments Also assumes that "refLocationProfilesRSA" has been previously defined

Usage

mixturePlotPanel(
  refLocationProfilesAcup,
  totProt,
  NstartMaterialFractions,
  errorReturn = FALSE,
  fitType,
  log2Transf = FALSE,
  eps = 0.001
)

Arguments

refLocationProfilesAcup	relative amount of a given cellular compartment protein that ends up in a given centrifugation fraction
totProt	vector of amounts starting material in each fraction
NstartMaterialFractions	number of starting material fractions
errorReturn	return all area-based errors if true
fitType	use RSA, NSA, or Acup
log2Transf	use log2-transformed values. Default is "FALSE"
eps	constant to avoid taking logs of zero

Value

mixErrorMat a list of errors for all mixtures

mooredf22/protlocassign0p1p1 documentation built on Feb. 7, 2022, 1:55 a.m.