protIndex: return index of a protein name, or (if exactMatch=TRUE)...
In mooredf22/protlocassign0p1p1: Compute constrained proportional assignments for fractionated protein abundance
Description
Usage
Arguments
Value
Examples
Description
return index of a protein name, or (if exactMatch=TRUE) indices of proteins starting with the string given in "protName"
Usage
1
Arguments
protName
name of protein to search for
profile
data frame of protein identifiers (protName) and their relative abundance in centrifugation fractions
exactMatch
default is F
Value
the protein name and its index (row in profile)
Examples
1
2
data(protNSA_AT5tmtMS2)
protIndex("TLN1", profile=protNSA_AT5tmtMS2)
mooredf22/protlocassign0p1p1 documentation built on Feb. 7, 2022, 1:55 a.m.
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Description Usage Arguments Value Examples
Description
return index of a protein name, or (if exactMatch=TRUE) indices of proteins starting with the string given in "protName"
Usage
1 |
Arguments
protName |
name of protein to search for |
profile |
data frame of protein identifiers (protName) and their relative abundance in centrifugation fractions |
exactMatch |
default is F |
Value
the protein name and its index (row in profile)
Examples
1 2 | data(protNSA_AT5tmtMS2)
protIndex("TLN1", profile=protNSA_AT5tmtMS2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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