RainSignificantPlot: RainSignificantPlot :

In nathansam/CircadianTools: Collection of Tools for Detecting Rhythmic Genes

Description

Prints or saves plots of the genes found to be most significant by RainAnalysis

Usage

RainSignificantPlot(results, dataset, number = 10, print = TRUE, save = FALSE)

Arguments

results	A dataframe generated by RainAnalysis
dataset	A transcriptomics dataset which was used with RainAnalysis to generate the results dataframe. First columns should be gene names. All other columns should be expression levels.
number	The number of most significant genes printed or saved
print	Logical. If TRUE renders significant genes in the plot viewer. Defaults to TRUE
save	Logical. If TRUE, saves plots to working directory. Defaults to FALSE.

Value

Prints or saves ggplot2 object(s).

Examples

results <- RainAnalysis(Laurasmappings, period = 24)
RainSignificantPlot(results,Laurasmappings, save=TRUE, number=15)

nathansam/CircadianTools documentation built on Dec. 26, 2019, 11:30 a.m.