SizeFilter: SizeFilter

In nathansam/CircadianTools: Collection of Tools for Detecting Rhythmic Genes

Description

Filters the genes with the smallest range from a transcriptomics dataset.

Usage

SizeFilter(dataset, cutoff = 0.1, nthreads = NULL)

Arguments

dataset	A transcriptomics dataset. First columns should be gene names. All other columns should be expression levels.
cutoff	Proportion of total number of genes (which show at least some activity) to be removed.
nthreads	Number of processor threads for the filtering. If not specifeid then the maximum number of logical cores are used.

Examples

rangedf <- SizeFilter(Laurasmappings, nthreads = 4)

nathansam/CircadianTools documentation built on Dec. 26, 2019, 11:30 a.m.