TAnalysis: TAnalysis:
In nathansam/CircadianTools: Collection of Tools for Detecting Rhythmic Genes
Description
Usage
Arguments
Value
Examples
View source: R/utility_functions.R
Description
A t-test is carried out on gene activity levels between time
points and the number of significant increases & decreases is returned.
Usage
1
TAnalysis(row.no, dataset, psignificance = 0.05)
Arguments
row.no
The row number of the gene of interest
dataset
A transcriptomics dataset. First columns should be gene names.
All other columns should be expression levels.
psignificance
The maximum p-value for which a result of a t-test is
classed as significant
Value
The number of signficant increases and decreases as a vector
Examples
1
ups.downs <- TAnalysis(row.no = 1, dataset = Laurasmappings, psignificance = 0.01)
nathansam/CircadianTools documentation built on Dec. 26, 2019, 11:30 a.m.
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Description Usage Arguments Value Examples
View source: R/utility_functions.R
Description
A t-test is carried out on gene activity levels between time points and the number of significant increases & decreases is returned.
Usage
1 | TAnalysis(row.no, dataset, psignificance = 0.05)
|
Arguments
row.no |
The row number of the gene of interest |
dataset |
A transcriptomics dataset. First columns should be gene names. All other columns should be expression levels. |
psignificance |
The maximum p-value for which a result of a t-test is classed as significant |
Value
The number of signficant increases and decreases as a vector
Examples
1 | ups.downs <- TAnalysis(row.no = 1, dataset = Laurasmappings, psignificance = 0.01)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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