Description Usage Arguments Value
Scale and center the data
1 2 |
object |
Seurat object |
genes.use |
Vector of gene names to scale/center. Default is all genes in object@data. |
data.use |
Can optionally pass a matrix of data to scale, default is object@data[genes.use,] |
do.scale |
Whether to scale the data. |
do.center |
Whether to center the data. |
scale.max |
Max value to accept for scaled data. The default is 10. Setting this can help reduce the effects of genes that are only expressed in a very small number of cells. |
Returns a seurat object with object@scale.data updated with scaled and/or centered data.
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