VizPCA: Visualize PCA genes

In nukappa/seurat_v2: Seurat : R toolkit for single cell genomics

Description

Visualize top genes associated with principal components

Usage

VizPCA(object, pcs.use = 1:5, num.genes = 30, use.full = FALSE,
  font.size = 0.5, nCol = NULL, do.balanced = FALSE)

Arguments

object	Seurat object
pcs.use	Number of PCs to display
num.genes	Number of genes to display
use.full	Use full PCA (i.e. the projected PCA, by default FALSE)
font.size	Font size
nCol	Number of columns to display
do.balanced	Return an equal number of genes with both + and - PC scores. If FALSE (by default), returns the top genes ranked by the score's absolute values

Value

Graphical, no return value

nukappa/seurat_v2 documentation built on May 24, 2019, 9:57 a.m.