compute_betweenness_degree: Function to compute betweenness and degree
In pcahan1/epoch: Dynamic GRN reconstruction from single cell RNA-Seq data
Description
Usage
Arguments
Value
Description
Function to compute betweenness and degree
Usage
1
2
3
4
5
compute_betweenness_degree(
dynnet,
weight_column = "zscore",
directed_graph = FALSE
)
Arguments
dynnet
result of dynamic GRN reconstruction
weight_column
name of column in dynnet to weight edges
directed_graph
if GRN is directed or not
Value
list of dataframes of active TFs in each epoch and transition, ranked by betweenness*degree
pcahan1/epoch documentation built on Feb. 14, 2022, 1:57 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Function to compute betweenness and degree
Usage
1 2 3 4 5 | compute_betweenness_degree(
dynnet,
weight_column = "zscore",
directed_graph = FALSE
)
|
Arguments
dynnet |
result of dynamic GRN reconstruction |
weight_column |
name of column in dynnet to weight edges |
directed_graph |
if GRN is directed or not |
Value
list of dataframes of active TFs in each epoch and transition, ranked by betweenness*degree
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.