dynamic_shortest_path_multiple: Function to return shortest path from multiple TFs to...

In pcahan1/epoch: Dynamic GRN reconstruction from single cell RNA-Seq data

Description

Function to return shortest path from multiple TFs to multiple targets in a dynamic network

Usage

dynamic_shortest_path_multiple(grn, from, to, weight_column = "weighted_score")

Arguments

from	the starting TFs
to	the end TFs
weight_column	column name in grnDF with edge weights that will be converted to distances
grnDF	a dyanmic network

Value

dataframe with shortest path, distance, normalized distance, and action

pcahan1/epoch documentation built on Feb. 14, 2022, 1:57 a.m.