Description Usage Arguments Value
View source: R/5_networkComparison.R
Compute a dynamic difference network
1 2 3 4 5 6 7 8 | dynamic_difference_network(
edgeDF,
epochs,
condition,
type,
diff_thresh = 3,
condition_thresh = 6
)
|
edgeDF |
the result of running edge_uniqueness |
epochs |
list of epoch gene assignments |
condition |
condition of interest, should be one of the treatment (aka network name) or column names in edgeDF |
type |
"on" or "off" specifies either finding edges that are active in the condition network but off others or inactive in condition network but active in others |
diff_thresh |
edge difference threshold to determine if edge is uniquely on or off |
condition_thresh |
edge weight theshold in condition network to keep or filter out in difference network |
list of dataframes representing the dynamic difference network
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