order_genes: Function that orders genes based on peak expression
In pcahan1/epoch: Dynamic GRN reconstruction from single cell RNA-Seq data
Description
Usage
Arguments
Value
View source: R/6_networkAnalysis.R
Description
Function that orders genes based on peak expression
Usage
1
order_genes(exp, sampTab, pseudotime_column, smooth = TRUE)
Arguments
exp
expression matrix
sampTab
sample table
pseudotime_column
column in sample table containing pseudotime annotation
smooth
whether or not to smooth expression across pseudotime
Value
pheatmap
pcahan1/epoch documentation built on Feb. 14, 2022, 1:57 a.m.
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Description Usage Arguments Value
View source: R/6_networkAnalysis.R
Description
Function that orders genes based on peak expression
Usage
1 | order_genes(exp, sampTab, pseudotime_column, smooth = TRUE)
|
Arguments
exp |
expression matrix |
sampTab |
sample table |
pseudotime_column |
column in sample table containing pseudotime annotation |
smooth |
whether or not to smooth expression across pseudotime |
Value
pheatmap
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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