Description Usage Arguments Value
View source: R/6_networkAnalysis.R
Useful plotting function to plot heatmap with pre-split expX
1 2 3 4 5 6 7 8 9 10 | plot_heatmap_by_treatment(
expList,
sampTab,
pseudotime_column = "latent_time",
toScale = T,
limits = c(0, 5),
smooth = TRUE,
anno_colors = NULL,
fontSize = 8
)
|
expList |
list of expression matrices |
sampTab |
sample table |
pseudotime_column |
column in sample table containing pseudotime annotation |
toScale |
whether or not to scale expression |
limits |
limits on expression |
smooth |
whether or not to smooth expression across pseudotime for cleaner plotting |
anno_colors |
annotation colors |
fontSize |
heatmap font size |
pheatmap
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.