rppaheat: rppaheat function

In pcheng84/TCGAbrowser: Explores and Analyzses TCGA Data

Description

Uses ComplexHeatmap to draw heatmap for RPPA data

Usage

rppaheat(pat2, rppa, gene)

Arguments

pat2	data frame generated by rnasubset function
rppa	data frame of RNAseq values
gene	character(1) Gene symbol of gene of interest

Value

ComplexHeatmap of top 100 significant differentially expressed genes

Examples

data(skcm)
gene <- "SOX10"
sox10.pat <- rnasubset(pat, rna, gene, 50)
rppaheat(sox10.pat, rppa, gene)

pcheng84/TCGAbrowser documentation built on Sept. 7, 2021, 8:28 p.m.