Files in rmflight/ccPaper
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DESCRIPTION
NAMESPACE
R/datasets.R
R/hypotheticalDataGeneration.R
inst/data/100GOResults.RData
inst/data/100GOSamples.RData
inst/data/100GeneResults.RData
inst/data/100GeneSamples.RData
inst/data/100NoiseResults.RData
inst/data/100NoiseSamples.RData
inst/data/cucCCOutput.RData
inst/data/cucGeneSetTest.RData
inst/data/cucRomer.RData
inst/data/lung.RData
inst/data/muscleGeneSetTest.RData
inst/data/muscleRomer.RData
inst/data/muscle_data.RData
inst/data/noiseSamples.RData
inst/data/noiseSweepRes.RData
inst/data/skinGeneSetTest.RData
inst/data/skinMuscleCCOutput.RData
inst/data/skinMuscleCompareOutput.RData
inst/data/skinRomer.RData
inst/data/skin_rma_data.RData
inst/data/uc_crohns_rawData.RData
inst/doc/datasets.R
inst/doc/datasets.Rmd
inst/doc/datasets.html
inst/doc/hypotheticalExample_vignette.R
inst/doc/hypotheticalExample_vignette.Rmd
inst/doc/hypotheticalExample_vignette.html
inst/doc/process_lung_data.R
inst/doc/process_lung_data.Rmd
inst/doc/process_lung_data.html
inst/doc/rcy_pieNodes.R
inst/doc/rcy_pieNodes.Rmd
inst/doc/rcy_pieNodes.html
inst/doc/responses2reviews.R
inst/doc/responses2reviews.Rmd
inst/doc/responses2reviews.html
inst/doc/skin_muscle_preprocessing.R
inst/doc/skin_muscle_preprocessing.Rmd
inst/doc/skin_muscle_preprocessing.html
inst/doc/uc_crohns_analysis.R
inst/doc/uc_crohns_analysis.Rmd
inst/doc/uc_crohns_analysis.html
inst/extdata/style.css
inst/tests/test_noiseSweep.R
man/calcFraction.Rd
man/collapseProbes.Rd
man/cucCCOutPut.RData.Rd
man/cucCCOutput.RData.Rd
man/cucRomer.RData.Rd
man/diffGOStats.Rd
man/fishersMethod.Rd
man/getDiffGenes.Rd
man/goSample.Rd
man/gseaDiffs.Rd
man/gseaProportion.Rd
man/gseaProportionFisher.Rd
man/gseaProportionMax.Rd
man/gseaProportionVary.Rd
man/gseaSizeRange.Rd
man/hyperGOMultiEnrichment.Rd
man/limitedRandomSample.Rd
man/lung.RData.Rd
man/mmGeneSetTest.Rd
man/multiGeneSetTest.Rd
man/multiSampleGeneSetTest.Rd
man/multicontrastRomer.Rd
man/muscleGeneSetTest.RData.Rd
man/muscleRomer.RData.Rd
man/muscle_data.RData.Rd
man/noiseSamples.RData.Rd
man/noiseSweepRes.RData.Rd
man/p2signed.Rd
man/possibleNoise.Rd
man/pvalueDiffSig.Rd
man/pvaluesMultiEnrich.Rd
man/rankGenes.Rd
man/sameGOStats.Rd
man/samplePValueGenGSEA.Rd
man/sampleTerms.Rd
man/sampletValueGenGSEA.Rd
man/skinGeneSetTest.RData.Rd
man/skinMuscleCCOutput.RData.Rd
man/skinRomer.RData.Rd
man/skin_rma_data.RData.Rd
man/sweepNoiseSample.Rd
man/trimGOFrac.Rd
man/uc_crohns_rawData.RData.Rd
readme.md
vignettes/datasets.Rmd
vignettes/findingData.R
vignettes/hypotheticalExample_vignette.Rmd
vignettes/process_lung_data.Rmd
vignettes/rcy_pieNodes.Rmd
vignettes/responses2reviews.Rmd
vignettes/skin_muscle_preprocessing.Rmd
vignettes/uc_crohns_analysis.Rmd
