gseaDiffs: results and diffs following genesettest

Description Usage Arguments Value

Description

results and diffs following genesettest

Usage

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  gseaDiffs(gseaRes, contrast = "down",
    orgLists = c("s1", "s2"))

Arguments

gseaRes

a list of results from doing geneSetTests

contrast

which alternative hypothesis to extract (for fake data only one should be valid)

orgLists

the names of the original samples to extract, will be compared with "comb"

Value

data.frame of -1*log of p-values, and difference


rmflight/ccPaper documentation built on May 27, 2019, 9:31 a.m.