trimGOFrac: trim go2gene and get fractions
In rmflight/ccPaper: work for categoryCompare paper revisions
Description
Usage
Arguments
Value
Description
for the cases of examining the "real" data, we need to
take a GO 2 gene mapping, get the gene 2 GO mapping and
find just those GO terms that actually have genes in the
DE list, and finally calculate the fractions.
Usage
1
trimGOFrac(go2gene, deList)
Arguments
go2gene
list of GO 2 gene mappings
deList
the differentially expressed gene list as a
character vector
Value
data.frame of fractions and counts
rmflight/ccPaper documentation built on May 27, 2019, 9:31 a.m.
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Description Usage Arguments Value
Description
for the cases of examining the "real" data, we need to take a GO 2 gene mapping, get the gene 2 GO mapping and find just those GO terms that actually have genes in the DE list, and finally calculate the fractions.
Usage
1 | trimGOFrac(go2gene, deList)
|
Arguments
go2gene |
list of GO 2 gene mappings |
deList |
the differentially expressed gene list as a
|
Value
data.frame of fractions and counts
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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