Description Usage Arguments Details Value
vary gsea proportion
1 | gseaProportionVary(inSize, sigProp, statistics)
|
inSize |
vector of sizes |
sigProp |
list of proportions, one for each sample |
statistics |
the statistics to use |
For each supplied inSize and sigProp, random indices of
inSize
are taken from the statistics. Based on
sigProp
, for each sample different numbers of
indices take values from the upper 50 of ranked values
and the lower 50 of ranked values. In this case each
entry in inSize
and denotes a different term, and
they are treated independently. Each list entry of
sigProp
is a sample, and each vector should be the
same length as inSize
. The list combined
method is based on averaging the statistics in this case.
list of lists for each term
, with index and
stats, stats
contains a column for each
sample, as well as a combined column.
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