pvaluesMultiEnrich: get p-values from multiple enrichments

Description Usage Arguments Details Value

View source: R/hypotheticalDataGeneration.R

Description

get p-values from multiple enrichments

Usage

1
2
  pvaluesMultiEnrich(geneListNames, useTerms,
    hyperEnrichList, log = TRUE)

Arguments

geneListNames

the names to combine and take the minimum

hyperEnrichList

the set of hypergeometric enrichment results

useTerms
log

return original or log-transformed values

Details

the data.frame returned has the p-values for each GO term from both the set based and list based results. The set-based value is the minimum value of all the set enrichments for that GO term, log transformed.

Value

data.frame, see details


rmflight/ccPaper documentation built on May 25, 2017, 4:26 a.m.