rankGenes: rank genes using limma

Description Usage Arguments Value

View source: R/hypotheticalDataGeneration.R

Description

rank genes using limma

Usage

1
2
3
  rankGenes(exprData, sampleStatus, doComps,
    dupStrategy = "minP", doAggregation = FALSE,
    aggregateIndex, adjust.method = "BH")

Arguments

exprData

log-expression values from an ExpressionSet

pData
sampleStatus

character vector describing the samples

doComps

character vector of which comparisons to make

dupStrategy

how to resolve duplicates, default is to take the smallest p-value

correction

which multiple testing correction to apply to the results

Value

list of data frames


rmflight/ccPaper documentation built on May 25, 2017, 4:26 a.m.