gseaProportionFisher: gseaProportion, combined using Fisher's method
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Description Usage Arguments Details Value

gseaProportion, combined using Fisher's method

1 2	gseaProportionFisher(inSize, sigProp, statistics, nSample = 2)

`inSize`	vector of sizes to sample
`sigProp`	vector of significant proportion, i.e. fraction above 50 rank
`statistics`	the set of statistics to use (will be ranked by function)
`nSample`	number of samples to use

For each supplied inSize and sigProp, random indices of inSize are taken from the statistics. Based on sigProp, for each sample different numbers of indices take values from the upper 50 of ranked values and the lower 50 of ranked values. In this case each entry in inSize and sigProp denotes a different term, and they are treated independently. The list combined method is based on averaging the statistics in this case.

list of lists for each term, with index and stats, stats contains a column for each sample, as well as a combined column.

rmflight/ccPaper documentation built on May 27, 2019, 9:31 a.m.