Description Usage Arguments Value See Also
For a list of samples and list of gene sets, do testing of the gene sets for each sample, as well as a meta-sample where there p-values for the samples are combined using Fisher's method
1 2 3 | multiSampleGeneSetTest(samplePValues, genesets,
alternative = "mixed", ranks.only = FALSE,
transform2Log = TRUE)
|
samplePValues |
list of p-values for each sample |
genesets |
list of gene sets to test |
alternative |
the alternative hypothesis to test |
ranks.only |
use the ranks only |
list with the gene set p-values for each sample, as well as the combined
geneSetTest
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