calcFraction: calculate fraction of genes annotated to GO terms
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Description
Usage
Arguments
Details
Value
Description
For the supplied list of GO 2 gene annotations, and lists
of genes, calculate the what fraction of a GO term is in
the gene list.
Usage
1
calcFraction(go2gene, geneList)
Arguments
go2gene
list of GO terms and genes they annotate
geneList
list of character vectors of genes
Details
returns a data.frame with the total count, and
fraction for each of the gene lists supplied, suitable
for plotting in ggplot2.
Value
data.frame
rmflight/ccPaper documentation built on May 27, 2019, 9:31 a.m.
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Description Usage Arguments Details Value
Description
For the supplied list of GO 2 gene annotations, and lists of genes, calculate the what fraction of a GO term is in the gene list.
Usage
1 | calcFraction(go2gene, geneList)
|
Arguments
go2gene |
list of GO terms and genes they annotate |
geneList |
list of character vectors of genes |
Details
returns a data.frame with the total count, and
fraction for each of the gene lists supplied, suitable
for plotting in ggplot2.
Value
data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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