addCachedYAMLValue: add a stored parameter value for the named config field
In sagrudd/nanopoRe: Accessory Methods for the Analysis of Oxford Nanopore Technologies DNA Sequence Data
Description
Usage
Arguments
Value
Examples
Description
add a stored parameter value for the named config field
Usage
1
addCachedYAMLValue(yaml = "config", field, value, subenv = NULL)
Arguments
yaml
the name of the yaml container to create
field
the parameter field to lookup
value
to value to update
subenv
the name of subenvironment for holding the yaml
Value
TRUE or FALSE if the change can be made
Examples
1
2
3
4
5
6
init()
yamlFile <- system.file("extdata", "cas9_demo.yaml", package = "nanopoRe")
bamFile <- system.file("extdata", "cas9_FAK76554.bam", package = "nanopoRe")
importConfigYAML(yamlFile=yamlFile)
addCachedYAMLValue(field="bam_file", value=bamFile)
getCachedYAMLValue(field="bam_file")
sagrudd/nanopoRe documentation built on June 7, 2020, 10:20 p.m.
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Description Usage Arguments Value Examples
Description
add a stored parameter value for the named config field
Usage
1 | addCachedYAMLValue(yaml = "config", field, value, subenv = NULL)
|
Arguments
yaml |
the name of the yaml container to create |
field |
the parameter field to lookup |
value |
to value to update |
subenv |
the name of subenvironment for holding the yaml |
Value
TRUE or FALSE if the change can be made
Examples
1 2 3 4 5 6 | init()
yamlFile <- system.file("extdata", "cas9_demo.yaml", package = "nanopoRe")
bamFile <- system.file("extdata", "cas9_FAK76554.bam", package = "nanopoRe")
importConfigYAML(yamlFile=yamlFile)
addCachedYAMLValue(field="bam_file", value=bamFile)
getCachedYAMLValue(field="bam_file")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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