getReferenceGenome: get path reference genome object
In sagrudd/nanopoRe: Accessory Methods for the Analysis of Oxford Nanopore Technologies DNA Sequence Data
Description
Usage
Value
Examples
View source: R/ReferenceGenome.R
Description
This method returns the stored path for the reference genome object
Usage
1
Value
character representation of path to stored fasta format file object
Examples
1
2
3
4
5
6
7
init()
referenceFasta <- system.file("extdata",
"Escherichia_coli_complete_genome.fasta",
package = "nanopoRe")
setReferenceGenome(referenceFasta)
# and check that something has been stored ...
getReferenceGenome()
sagrudd/nanopoRe documentation built on June 7, 2020, 10:20 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Value Examples
View source: R/ReferenceGenome.R
Description
This method returns the stored path for the reference genome object
Usage
1 |
Value
character representation of path to stored fasta format file object
Examples
1 2 3 4 5 6 7 | init()
referenceFasta <- system.file("extdata",
"Escherichia_coli_complete_genome.fasta",
package = "nanopoRe")
setReferenceGenome(referenceFasta)
# and check that something has been stored ...
getReferenceGenome()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.