enrichmentCoverageTypeOverChromosomes: prepare a barchart showing number of bases per chromosome...
In sagrudd/nanopoRe: Accessory Methods for the Analysis of Oxford Nanopore Technologies DNA Sequence Data
Description
Usage
Value
Examples
View source: R/EnrichmentPresentation.R
Description
prepare a barchart showing number of bases per chromosome coloured by
mapping-type; enables looking for unexpected distributions of off-target,
background etc per chromosome
Usage
1
Value
ggplot2 format barchart showing fraction of mapping types per
chromosome
Examples
1
2
3
4
yamlFile <- system.file("extdata", "cas9_demo.yaml", package = "nanopoRe")
importConfigYAML(yamlFile=yamlFile)
importEnrichmentResults(system.file("extdata", package="nanopoRe"))
enrichmentCoverageTypeOverChromosomes()
sagrudd/nanopoRe documentation built on June 7, 2020, 10:20 p.m.
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Description Usage Value Examples
View source: R/EnrichmentPresentation.R
Description
prepare a barchart showing number of bases per chromosome coloured by mapping-type; enables looking for unexpected distributions of off-target, background etc per chromosome
Usage
1 |
Value
ggplot2 format barchart showing fraction of mapping types per chromosome
Examples
1 2 3 4 | yamlFile <- system.file("extdata", "cas9_demo.yaml", package = "nanopoRe")
importConfigYAML(yamlFile=yamlFile)
importEnrichmentResults(system.file("extdata", package="nanopoRe"))
enrichmentCoverageTypeOverChromosomes()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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