enrichmentOffTargetKaryogram: prepare a karyogram shaded with regions of off-target mapping
In sagrudd/nanopoRe: Accessory Methods for the Analysis of Oxford Nanopore Technologies DNA Sequence Data
Description
Usage
Arguments
Value
Examples
View source: R/EnrichmentPresentation.R
Description
prepare a karyogram shaded with regions of off-target mapping
Usage
1
enrichmentOffTargetKaryogram(fill = FALSE)
Arguments
fill
- if TRUE will populate chromosome lengths and ids for human
Value
path to png format figure of plot
Examples
1
2
3
4
yamlFile <- system.file("extdata", "cas9_demo.yaml", package = "nanopoRe")
importConfigYAML(yamlFile=yamlFile)
importEnrichmentResults(system.file("extdata", package="nanopoRe"))
enrichmentOffTargetKaryogram()
sagrudd/nanopoRe documentation built on June 7, 2020, 10:20 p.m.
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Description Usage Arguments Value Examples
View source: R/EnrichmentPresentation.R
Description
prepare a karyogram shaded with regions of off-target mapping
Usage
1 | enrichmentOffTargetKaryogram(fill = FALSE)
|
Arguments
fill |
- if TRUE will populate chromosome lengths and ids for human |
Value
path to png format figure of plot
Examples
1 2 3 4 | yamlFile <- system.file("extdata", "cas9_demo.yaml", package = "nanopoRe")
importConfigYAML(yamlFile=yamlFile)
importEnrichmentResults(system.file("extdata", package="nanopoRe"))
enrichmentOffTargetKaryogram()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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