metacell: Meta cell analysis for single cell RNA-seq data

mcell_gset_filter_cov

R Documentation

gnereate/filter gene features from coverage threshold in gstat table

gnereate/filter gene features from coverage threshold in gstat table

mcell_gset_filter_cov(gstat_id, gset_id, T_tot, T_top3, force_new = F)

`gstat_id`	the ID of the gstat object to use
`gset_id`	if this exists, filter_varmean will restrict hte current genes in the set with genes matching the var mean threshold, if not, it will generate a new gene sets object with one set including all high variance genes
`T_tot`	total coverage threhsold
`T_top3`	threshold value for the third highest umi count for the gene (only genes with top3>T_top3 are used)