mcell_new_mc2d: Generate a new metacell in scdb
In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data

mcell_new_mc2d

R Documentation

Generate a new metacell in scdb

Description

This constructs a meta cell cover object and puts it into scdb. It gets an MC assignment (cell->MC_ID), and a matrix, and call standard api of this class to compute the footprints.

Usage

mcell_new_mc2d(mc2d_id, mc_id, mc_x, mc_y, sc_x, sc_y, graph)

Arguments

`mc2d_id`	new id of 2d object to add
`mc_id`	id of scdb meta cell object we link to
`mc_x`	x coordinates of metacells
`mc_y`	y coordinates of metacells
`sc_x`	x coordinates of cells
`sc_y`	y coordinates of cells
`graph`	graph data frame (fields mc1,mc2 specifying edges between mc's)