mcell_plot_cross_mc: Plotting a matrix of co-occurences between two metacell...

In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data

Plotting a matrix of co-occurences between two metacell covers of the same dataset

Description

Plotting a matrix of co-occurences between two metacell covers of the same dataset

Usage

mcell_plot_cross_mc(mc_id1, mc_id2, ord_1 = NULL, ord_2 = NULL, not_log = F)

Arguments

mc_id1	first mc object to use
mc_id2	second mc object to use
ord_1	optional ordering of first MC set (default is original order)
ord_2	optional ordering of second MC set (Default is based on max intersection with the first set)
not_log	use this to avoid using log scale on the colors - making the best match MC more pronanouced

tanaylab/metacell documentation built on Jan. 29, 2025, 1:34 a.m.