mcell_plot_umis_per_cell: Plot histogram of total number of umis per cell in the umis...
In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data
View source: R/scmat_batch_stat.r
mcell_plot_umis_per_cell R Documentation
Plot histogram of total number of umis per cell in the umis matrix
Description
Plot histogram of total number of umis per cell in the umis matrix
Usage
mcell_plot_umis_per_cell(mat_id, min_umis_cutoff = NA, bin_for_cutoff = 50)
Arguments
mat_id
id of the mat to use
min_umis_cutoff
If not null, will mark this cutoff by a line. If NA, auto calculate by finding the first bin in the histogram with more cells then its predecessor.
bin_for_cutoff
bin size for histogram used to auto find min_umis_cutoff
Value
min_umis_cutoff (either the given, the calculated, or null)
tanaylab/metacell documentation built on Jan. 29, 2025, 1:34 a.m.
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View source: R/scmat_batch_stat.r
| mcell_plot_umis_per_cell | R Documentation |
Plot histogram of total number of umis per cell in the umis matrix
Description
Plot histogram of total number of umis per cell in the umis matrix
Usage
mcell_plot_umis_per_cell(mat_id, min_umis_cutoff = NA, bin_for_cutoff = 50)
Arguments
mat_id |
id of the mat to use |
min_umis_cutoff |
If not null, will mark this cutoff by a line. If NA, auto calculate by finding the first bin in the histogram with more cells then its predecessor. |
bin_for_cutoff |
bin size for histogram used to auto find min_umis_cutoff |
Value
min_umis_cutoff (either the given, the calculated, or null)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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