scm_downsamp: downsampl

View source: R/utils.r

scm_downsampR Documentation

downsampl

Description

generate a umi matrix in which each cell (Column) is downsampled to a fixed number of molecules. This is a ehavy an inefficient proces at the moment, so we split it into chunks and run parallel using doMC

Usage

scm_downsamp(umis, n)

Arguments

umis

the umi matrix

n

the constant number of molecules per cell in the output matrix


tanaylab/metacell documentation built on Oct. 19, 2023, 1:01 p.m.